Comparative Genomics

Methods and Protocols

AvJoão Carlos Setubal,Peter F. Stadler

Inbunden, Engelska, 2024

Del i serien Methods in Molecular Biology

2 327 kr

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Beskrivning

This second edition provides new and updated chapters covering computational and mathematical techniques and concepts related to the field of comparative genomics.

Produktinformation

Utgivningsdatum:2024-06-01
Mått:178 x 254 x 40 mm
Vikt:1 373 g
Format:Inbunden
Språk:Engelska
Serie:Methods in Molecular Biology
Antal sidor:621
Upplaga:2
Förlag:Springer-Verlag New York Inc.
ISBN:9781071638378

Utforska kategorier

Biovetenskap inom Naturvetenskap och teknik

Innehållsförteckning

The theory of gene family histories.- Protein-coding gene families in prokaryote genome comparisons.- Family-free genome comparison.- Methods for pangenomic core detection.- Step-by-step bacterial genome comparison.- How to obtain and compare Metagenome-Assembled Genomes.- Comparative genome annotation.- Annotation and comparative genomics of Prokaryotic Transposable Elements.- Genome Rearrangement Analysis: Cut and Join Genome Rearrangements and Gene Cluster Preserving Approaches.- AGO, a framework for the reconstruction of ancestral syntenies and gene orders.- A guide to phylogenomic inference.- Comparative RNA Genomics.- Bioinformatic approaches for comparative analysis of viruses.- Comparative Analyses of Bacteriophage Genomes.- Comparative genomics of sex, chromosomes, and sex chromosomes in Caenorhabditis elegans and other nematodes.- Comparative evolutionary genomics in insects.- Comparative Methods for Demystifying Spatial Transcriptomics.- Comparative genomic analysis of bacterial data in BV-BRC: an example exploring antimicrobial resistance.- VEuPathDB resources: a platform for free online data exploration, integration, and analysis.- A practical approach to using the Genomic Standards Consortium MIxS reporting standard for comparative genomics and metagenomics.