Protein Bioinformatics

Inbunden, Engelska, 2024

Del 2836 i serien Methods in Molecular Biology

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Beskrivning

This detailed volume explores techniques for protein bioinformatics research, including databases, software tools, and computational methods, in the context of protein science or proteomics and opening to other omics areas.

Produktinformation

Utgivningsdatum:2024-07-13
Mått:178 x 254 x 27 mm
Vikt:925 g
Format:Inbunden
Språk:Engelska
Serie:Methods in Molecular Biology
Antal sidor:371
Upplaga:2024
Förlag:Springer-Verlag New York Inc.
ISBN:9781071640067

Utforska kategorier

Biokemi inom Naturvetenskap och teknik
Biovetenskap inom Naturvetenskap och teknik

Innehållsförteckning

Exploring the Alternative Proteome with OpenProt and Mass Spectrometry.- Identification of Novel Bacterial Microproteins Encoded by Small Open Reading Frames Using a Computational Proteogenomics Workflow.- Demystifying PTM Identification Using MODplus: Best Practices and Pitfalls.- Understanding PTM Cross-Talk Through a Visualization Tool, PTMViz.- Integrating HexNAcQuest with Glycoproteomics Data Analysis Software to Distinguish HexNAc Isomers on Peptides.- UniCarb-DB, an MS/MS Experimental Glycomic Fragmentation Database.- Integration of Web-Based Tools to Visualize, Integrate, and Interpret Glycogene Expression and Glycomics Data.- PGFinder, an Open Source Software for Peptidoglycomics: The Structural Analysis of Bacterial Peptidoglycan by LC-MS.- Making MS Omics Data ML Ready: SpeCollate Protocols.- AI-Assisted Processing Pipeline to Boost Protein Isoform Detection.- Biodiversity Analysis of Metaproteomics Samples with Unipept: A Comprehensive Tutorial.- Analysis and Visualization of Protein Channels, Tunnels, and Pores with MOLEonline & ChannelsDB 2.0.- AlphaFold2 for Protein Structure Prediction: Best Practices and Critical Analyses.- Detection and Analysis of Short Linear Motif-Based Protein-Protein Interactions with SLiMAn2 Web Server.- Interpreting Gene Ontology Annotations Derived from Sequence Homology Methods.- SACCHARIS v2: Streamlining Prediction of Carbohydrate-Active Enzyme Specificities Within Large Datasets.- SignalP: The Evolution of a Web Server.